Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.88□□□□□ -0.03
Pdx1P52946 Gm9727-201ENSMUST00000161387 555 ntBASIC14.88□□□□□ -0.03
Pdx1P52946 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.88□□□□□ -0.03
Pdx1P52946 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.88□□□□□ -0.03
Pdx1P52946 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pdx1P52946 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.88□□□□□ -0.03
Pdx1P52946 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pdx1P52946 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pdx1P52946 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdx1P52946 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdx1P52946 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.88□□□□□ -0.03
Pdx1P52946 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pdx1P52946 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pdx1P52946 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.87□□□□□ -0.03
Pdx1P52946 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.87□□□□□ -0.03
Pdx1P52946 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.87□□□□□ -0.03
Pdx1P52946 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pdx1P52946 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pdx1P52946 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.87□□□□□ -0.03
Pdx1P52946 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Pdx1P52946 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pdx1P52946 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.87□□□□□ -0.03
Pdx1P52946 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdx1P52946 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdx1P52946 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Pdx1P52946 Gm12008-201ENSMUST00000117791 755 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 Gm12260-201ENSMUST00000122447 411 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Pdx1P52946 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.86□□□□□ -0.03
Pdx1P52946 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Pdx1P52946 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pdx1P52946 Gm43767-201ENSMUST00000198933 381 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 Gm6443-201ENSMUST00000203599 874 ntBASIC14.86□□□□□ -0.03
Pdx1P52946 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdx1P52946 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pdx1P52946 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdx1P52946 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdx1P52946 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms