Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmga2P52927 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga2P52927 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Hmga2P52927 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Hmga2P52927 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hmga2P52927 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Hmga2P52927 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.81□□□□□ -0.36
Hmga2P52927 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.81□□□□□ -0.36
Hmga2P52927 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmga2P52927 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmga2P52927 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Hmga2P52927 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmga2P52927 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmga2P52927 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmga2P52927 Gm15358-201ENSMUST00000119249 520 ntBASIC12.8□□□□□ -0.36
Hmga2P52927 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.8□□□□□ -0.36
Hmga2P52927 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmga2P52927 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Hmga2P52927 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmga2P52927 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.8□□□□□ -0.36
Hmga2P52927 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmga2P52927 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmga2P52927 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmga2P52927 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmga2P52927 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmga2P52927 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Hmga2P52927 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmga2P52927 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmga2P52927 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Gm15565-201ENSMUST00000118890 427 ntBASIC12.79□□□□□ -0.36
Hmga2P52927 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.79□□□□□ -0.36
Hmga2P52927 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmga2P52927 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms