Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RoraP51448 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RoraP51448 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.22□□□□□ -0.13
RoraP51448 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RoraP51448 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RoraP51448 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.22□□□□□ -0.13
RoraP51448 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RoraP51448 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.22□□□□□ -0.13
RoraP51448 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.22□□□□□ -0.13
RoraP51448 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
RoraP51448 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
RoraP51448 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
RoraP51448 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RoraP51448 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RoraP51448 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
RoraP51448 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
RoraP51448 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.21□□□□□ -0.13
RoraP51448 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Gm9385-201ENSMUST00000117563 472 ntBASIC14.21□□□□□ -0.13
RoraP51448 Gm13365-201ENSMUST00000121188 973 ntBASIC14.21□□□□□ -0.13
RoraP51448 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.21□□□□□ -0.13
RoraP51448 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.21□□□□□ -0.13
RoraP51448 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RoraP51448 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RoraP51448 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RoraP51448 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RoraP51448 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RoraP51448 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.21□□□□□ -0.14
RoraP51448 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RoraP51448 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RoraP51448 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.21□□□□□ -0.14
RoraP51448 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RoraP51448 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.21□□□□□ -0.14
RoraP51448 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RoraP51448 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RoraP51448 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RoraP51448 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RoraP51448 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Gm11745-201ENSMUST00000121669 448 ntBASIC14.2□□□□□ -0.14
RoraP51448 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RoraP51448 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.2□□□□□ -0.14
RoraP51448 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RoraP51448 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.2□□□□□ -0.14
RoraP51448 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RoraP51448 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RoraP51448 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
RoraP51448 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms