Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Gm7775-201ENSMUST00000218871 853 ntBASIC18.04■□□□□ 0.48
Atp6v1aP50516 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.04■□□□□ 0.48
Atp6v1aP50516 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.04■□□□□ 0.48
Atp6v1aP50516 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atp6v1aP50516 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.03■□□□□ 0.48
Atp6v1aP50516 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Syt7-204ENSMUST00000223586 1344 ntBASIC18.03■□□□□ 0.48
Atp6v1aP50516 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Gm44344-201ENSMUST00000200287 129 ntBASIC18.03■□□□□ 0.48
Atp6v1aP50516 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atp6v1aP50516 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.02■□□□□ 0.48
Atp6v1aP50516 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm27680-201ENSMUST00000184192 160 ntBASIC18.02■□□□□ 0.48
Atp6v1aP50516 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm7653-201ENSMUST00000214567 508 ntBASIC18.02■□□□□ 0.48
Atp6v1aP50516 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atp6v1aP50516 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.02■□□□□ 0.47
Atp6v1aP50516 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Atp6v1aP50516 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atp6v1aP50516 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.02■□□□□ 0.47
Atp6v1aP50516 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.01■□□□□ 0.47
Atp6v1aP50516 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.01■□□□□ 0.47
Atp6v1aP50516 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18■□□□□ 0.47
Atp6v1aP50516 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6v1aP50516 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6v1aP50516 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atp6v1aP50516 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Atp6v1aP50516 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms