Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Msh2P43247 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh2P43247 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh2P43247 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh2P43247 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh2P43247 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh2P43247 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.52■□□□□ 0.08
Msh2P43247 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.52■□□□□ 0.08
Msh2P43247 Gm8655-201ENSMUST00000221159 852 ntBASIC15.52■□□□□ 0.08
Msh2P43247 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.52■□□□□ 0.08
Msh2P43247 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh2P43247 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Gm8097-201ENSMUST00000117903 829 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm23547-201ENSMUST00000158210 271 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.51■□□□□ 0.07
Msh2P43247 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Gm44357-201ENSMUST00000195897 142 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm19658-201ENSMUST00000196231 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44367-201ENSMUST00000196836 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44350-201ENSMUST00000197197 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44390-201ENSMUST00000197533 144 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44313-201ENSMUST00000198018 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44486-201ENSMUST00000198508 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44314-201ENSMUST00000199263 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44394-201ENSMUST00000199558 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44484-201ENSMUST00000199873 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44466-201ENSMUST00000200264 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm44359-201ENSMUST00000200671 138 ntBASIC15.51■□□□□ 0.07
Msh2P43247 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Msh2P43247 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Msh2P43247 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh2P43247 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.5■□□□□ 0.07
Msh2P43247 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.5■□□□□ 0.07
Msh2P43247 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.5■□□□□ 0.07
Msh2P43247 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.5■□□□□ 0.07
Msh2P43247 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.5■□□□□ 0.07
Msh2P43247 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.5■□□□□ 0.07
Msh2P43247 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
Msh2P43247 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.5■□□□□ 0.07
Msh2P43247 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Msh2P43247 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh2P43247 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.49■□□□□ 0.07
Msh2P43247 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.49■□□□□ 0.07
Msh2P43247 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.49■□□□□ 0.07
Msh2P43247 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Msh2P43247 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Msh2P43247 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Msh2P43247 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Msh2P43247 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Msh2P43247 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Msh2P43247 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Msh2P43247 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms