Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 BC001981-202ENSMUST00000191393 1545 ntBASIC15.79■□□□□ 0.12
HttP42859 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.79■□□□□ 0.12
HttP42859 Gm2451-201ENSMUST00000199447 999 ntBASIC15.79■□□□□ 0.12
HttP42859 Gm10290-201ENSMUST00000200451 999 ntBASIC15.79■□□□□ 0.12
HttP42859 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.79■□□□□ 0.12
HttP42859 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 App-207ENSMUST00000227737 2827 ntBASIC15.79■□□□□ 0.12
HttP42859 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.79■□□□□ 0.12
HttP42859 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
HttP42859 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.78■□□□□ 0.12
HttP42859 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HttP42859 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.78■□□□□ 0.12
HttP42859 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.78■□□□□ 0.12
HttP42859 Gm27516-201ENSMUST00000184237 98 ntBASIC15.78■□□□□ 0.12
HttP42859 Gm45930-201ENSMUST00000221330 292 ntBASIC15.78■□□□□ 0.12
HttP42859 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
HttP42859 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.78■□□□□ 0.12
HttP42859 Gm5370-201ENSMUST00000187187 574 ntBASIC15.78■□□□□ 0.12
HttP42859 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.78■□□□□ 0.12
HttP42859 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.78■□□□□ 0.12
HttP42859 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HttP42859 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
HttP42859 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HttP42859 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HttP42859 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HttP42859 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HttP42859 Gm19309-201ENSMUST00000218295 205 ntBASIC15.77■□□□□ 0.12
HttP42859 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HttP42859 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HttP42859 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HttP42859 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HttP42859 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HttP42859 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HttP42859 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.77■□□□□ 0.11
HttP42859 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.77■□□□□ 0.11
HttP42859 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HttP42859 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HttP42859 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HttP42859 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HttP42859 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.77■□□□□ 0.11
HttP42859 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HttP42859 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.76■□□□□ 0.11
HttP42859 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.76■□□□□ 0.11
HttP42859 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.76■□□□□ 0.11
HttP42859 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.76■□□□□ 0.11
HttP42859 Gm19184-201ENSMUST00000196798 928 ntBASIC15.76■□□□□ 0.11
HttP42859 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.76■□□□□ 0.11
HttP42859 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.76■□□□□ 0.11
HttP42859 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
HttP42859 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
HttP42859 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Gm12585-201ENSMUST00000117307 290 ntBASIC15.76■□□□□ 0.11
HttP42859 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.76■□□□□ 0.11
HttP42859 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
HttP42859 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HttP42859 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HttP42859 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HttP42859 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HttP42859 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.75■□□□□ 0.11
HttP42859 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HttP42859 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms