Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Fen1P39749 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Fen1P39749 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.16■□□□□ 0.02
Fen1P39749 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Fen1P39749 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.16■□□□□ 0.02
Fen1P39749 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Gm7284-201ENSMUST00000131667 944 ntBASIC15.16■□□□□ 0.02
Fen1P39749 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.16■□□□□ 0.02
Fen1P39749 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.16■□□□□ 0.02
Fen1P39749 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Fen1P39749 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Fen1P39749 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Fen1P39749 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Fen1P39749 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.15■□□□□ 0.02
Fen1P39749 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Fen1P39749 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Gm9013-201ENSMUST00000132939 882 ntBASIC15.15■□□□□ 0.02
Fen1P39749 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Gm25406-201ENSMUST00000157599 105 ntBASIC15.15■□□□□ 0.02
Fen1P39749 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.15■□□□□ 0.02
Fen1P39749 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.15■□□□□ 0.02
Fen1P39749 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Fen1P39749 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Fen1P39749 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Fen1P39749 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.15■□□□□ 0.02
Fen1P39749 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Fen1P39749 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Fen1P39749 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.14■□□□□ 0.01
Fen1P39749 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Fen1P39749 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.14■□□□□ 0.01
Fen1P39749 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fen1P39749 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Fen1P39749 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.13■□□□□ 0.01
Fen1P39749 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Fen1P39749 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms