Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm24644-201ENSMUST00000157114 139 ntBASIC19.67■□□□□ 0.74
Col18a1P39061 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.67■□□□□ 0.74
Col18a1P39061 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col18a1P39061 Gm19078-201ENSMUST00000206311 727 ntBASIC19.67■□□□□ 0.74
Col18a1P39061 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC19.67■□□□□ 0.74
Col18a1P39061 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Col18a1P39061 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Col18a1P39061 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Col18a1P39061 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Dctn4-202ENSMUST00000223590 1530 ntBASIC19.67■□□□□ 0.74
Col18a1P39061 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.67■□□□□ 0.74
Col18a1P39061 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC19.67■□□□□ 0.74
Col18a1P39061 CU024892.2-201ENSMUST00000224608 832 ntBASIC19.67■□□□□ 0.74
Col18a1P39061 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC19.67■□□□□ 0.74
Col18a1P39061 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col18a1P39061 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC19.66■□□□□ 0.74
Col18a1P39061 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.66■□□□□ 0.74
Col18a1P39061 Gm9299-201ENSMUST00000206392 1140 ntBASIC19.66■□□□□ 0.74
Col18a1P39061 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.66■□□□□ 0.74
Col18a1P39061 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Col18a1P39061 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col18a1P39061 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Col18a1P39061 Rn7s1-201ENSMUST00000174924 300 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Rn7s2-201ENSMUST00000175032 300 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Gm26461-201ENSMUST00000175064 290 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC19.65■□□□□ 0.74
Col18a1P39061 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col18a1P39061 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col18a1P39061 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm13050-201ENSMUST00000122149 1345 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Rarb-207ENSMUST00000225921 2756 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col18a1P39061 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC19.65■□□□□ 0.74
Col18a1P39061 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm8598-201ENSMUST00000221184 836 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Gm9823-201ENSMUST00000051212 327 ntBASIC19.65■□□□□ 0.74
Col18a1P39061 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col18a1P39061 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col18a1P39061 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Col18a1P39061 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col18a1P39061 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col18a1P39061 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.64■□□□□ 0.73
Col18a1P39061 Gm12928-201ENSMUST00000117115 573 ntBASIC19.64■□□□□ 0.73
Col18a1P39061 Gm11803-201ENSMUST00000119966 444 ntBASIC19.64■□□□□ 0.73
Col18a1P39061 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC19.64■□□□□ 0.73
Col18a1P39061 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Gm26464-201ENSMUST00000157094 305 ntBASIC19.64■□□□□ 0.73
Col18a1P39061 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col18a1P39061 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.64■□□□□ 0.73
Col18a1P39061 Gm5370-201ENSMUST00000187187 574 ntBASIC19.64■□□□□ 0.73
Col18a1P39061 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Col18a1P39061 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col18a1P39061 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.63■□□□□ 0.73
Col18a1P39061 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Gm15376-201ENSMUST00000122258 783 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms