Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Upk2P38575 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upk2P38575 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Upk2P38575 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Upk2P38575 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.2□□□□□ -0.3
Upk2P38575 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.2□□□□□ -0.3
Upk2P38575 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Upk2P38575 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
Upk2P38575 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.2□□□□□ -0.3
Upk2P38575 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.2□□□□□ -0.3
Upk2P38575 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Upk2P38575 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk2P38575 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk2P38575 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Upk2P38575 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.19□□□□□ -0.3
Upk2P38575 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.19□□□□□ -0.3
Upk2P38575 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.19□□□□□ -0.3
Upk2P38575 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.19□□□□□ -0.3
Upk2P38575 Mir5131-201ENSMUST00000175426 93 ntBASIC13.19□□□□□ -0.3
Upk2P38575 Mir5126-201ENSMUST00000175513 77 ntBASIC13.19□□□□□ -0.3
Upk2P38575 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.19□□□□□ -0.3
Upk2P38575 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.19□□□□□ -0.3
Upk2P38575 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Upk2P38575 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Upk2P38575 Gm15590-201ENSMUST00000078419 552 ntBASIC13.19□□□□□ -0.3
Upk2P38575 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Upk2P38575 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Upk2P38575 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk2P38575 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Upk2P38575 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.18□□□□□ -0.3
Upk2P38575 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.18□□□□□ -0.3
Upk2P38575 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Upk2P38575 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk2P38575 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk2P38575 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Upk2P38575 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Upk2P38575 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Upk2P38575 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Upk2P38575 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Upk2P38575 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Upk2P38575 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms