Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.98□□□□□ -0.33
Slc6a1P31648 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Slc6a1P31648 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc6a1P31648 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.97□□□□□ -0.33
Slc6a1P31648 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Slc6a1P31648 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.97□□□□□ -0.33
Slc6a1P31648 Gm6257-201ENSMUST00000163864 910 ntBASIC12.97□□□□□ -0.33
Slc6a1P31648 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.97□□□□□ -0.33
Slc6a1P31648 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Slc6a1P31648 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.97□□□□□ -0.33
Slc6a1P31648 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Slc6a1P31648 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slc6a1P31648 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Slc6a1P31648 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Slc6a1P31648 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Gm29518-201ENSMUST00000190858 372 ntBASIC12.96□□□□□ -0.33
Slc6a1P31648 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.96□□□□□ -0.33
Slc6a1P31648 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.96□□□□□ -0.33
Slc6a1P31648 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Slc6a1P31648 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Slc6a1P31648 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Slc6a1P31648 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.96□□□□□ -0.34
Slc6a1P31648 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Slc6a1P31648 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Slc6a1P31648 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms