Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VtnP29788 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.64□□□□□ -0.23
VtnP29788 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.64□□□□□ -0.23
VtnP29788 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.64□□□□□ -0.23
VtnP29788 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VtnP29788 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.64□□□□□ -0.23
VtnP29788 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VtnP29788 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.64□□□□□ -0.23
VtnP29788 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.64□□□□□ -0.23
VtnP29788 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.64□□□□□ -0.23
VtnP29788 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VtnP29788 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.63□□□□□ -0.23
VtnP29788 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.63□□□□□ -0.23
VtnP29788 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
VtnP29788 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
VtnP29788 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.63□□□□□ -0.23
VtnP29788 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
VtnP29788 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.63□□□□□ -0.23
VtnP29788 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
VtnP29788 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
VtnP29788 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.63□□□□□ -0.23
VtnP29788 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.63□□□□□ -0.23
VtnP29788 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VtnP29788 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VtnP29788 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VtnP29788 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.62□□□□□ -0.23
VtnP29788 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.62□□□□□ -0.23
VtnP29788 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.62□□□□□ -0.23
VtnP29788 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VtnP29788 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.62□□□□□ -0.23
VtnP29788 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VtnP29788 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.62□□□□□ -0.23
VtnP29788 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
VtnP29788 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VtnP29788 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
VtnP29788 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VtnP29788 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VtnP29788 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
VtnP29788 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VtnP29788 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
VtnP29788 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VtnP29788 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
VtnP29788 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VtnP29788 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms