Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.89■□□□□ 0.29
Col2a1P28481 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.89■□□□□ 0.29
Col2a1P28481 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.89■□□□□ 0.29
Col2a1P28481 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Gm5186-201ENSMUST00000218781 920 ntBASIC16.89■□□□□ 0.29
Col2a1P28481 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.89■□□□□ 0.29
Col2a1P28481 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col2a1P28481 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col2a1P28481 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col2a1P28481 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gm4875-201ENSMUST00000118257 786 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gm7730-201ENSMUST00000212486 454 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 Gm2423-201ENSMUST00000074863 733 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col2a1P28481 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.88■□□□□ 0.29
Col2a1P28481 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col2a1P28481 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Syt7-204ENSMUST00000223586 1344 ntBASIC16.88■□□□□ 0.29
Col2a1P28481 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Col2a1P28481 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col2a1P28481 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col2a1P28481 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.87■□□□□ 0.29
Col2a1P28481 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.87■□□□□ 0.29
Col2a1P28481 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.87■□□□□ 0.29
Col2a1P28481 Mir1897-201ENSMUST00000122581 272 ntBASIC16.87■□□□□ 0.29
Col2a1P28481 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Col2a1P28481 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.87■□□□□ 0.29
Col2a1P28481 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.87■□□□□ 0.29
Col2a1P28481 Gm46209-201ENSMUST00000217912 553 ntBASIC16.87■□□□□ 0.29
Col2a1P28481 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.87■□□□□ 0.29
Col2a1P28481 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col2a1P28481 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col2a1P28481 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col2a1P28481 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col2a1P28481 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms