Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Cd40lgP27548 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cd40lgP27548 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cd40lgP27548 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.89□□□□□ -0.19
Cd40lgP27548 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.88□□□□□ -0.19
Cd40lgP27548 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cd40lgP27548 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.88□□□□□ -0.19
Cd40lgP27548 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.88□□□□□ -0.19
Cd40lgP27548 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.88□□□□□ -0.19
Cd40lgP27548 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cd40lgP27548 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.88□□□□□ -0.19
Cd40lgP27548 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cd40lgP27548 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cd40lgP27548 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.87□□□□□ -0.19
Cd40lgP27548 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cd40lgP27548 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.87□□□□□ -0.19
Cd40lgP27548 Gm18489-201ENSMUST00000172565 551 ntBASIC13.87□□□□□ -0.19
Cd40lgP27548 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.87□□□□□ -0.19
Cd40lgP27548 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.87□□□□□ -0.19
Cd40lgP27548 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cd40lgP27548 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.87□□□□□ -0.19
Cd40lgP27548 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Cd40lgP27548 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cd40lgP27548 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms