Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
BdnfP21237 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.44□□□□□ -0.1
BdnfP21237 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Gm12895-201ENSMUST00000122214 226 ntBASIC14.44□□□□□ -0.1
BdnfP21237 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
BdnfP21237 Gm27357-201ENSMUST00000183754 135 ntBASIC14.44□□□□□ -0.1
BdnfP21237 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
BdnfP21237 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.44□□□□□ -0.1
BdnfP21237 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
BdnfP21237 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BdnfP21237 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.44□□□□□ -0.1
BdnfP21237 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
BdnfP21237 Carlr-201ENSMUST00000181515 2574 ntBASIC14.43□□□□□ -0.1
BdnfP21237 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
BdnfP21237 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.43□□□□□ -0.1
BdnfP21237 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.43□□□□□ -0.1
BdnfP21237 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.43□□□□□ -0.1
BdnfP21237 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.43□□□□□ -0.1
BdnfP21237 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.43□□□□□ -0.1
BdnfP21237 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BdnfP21237 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
BdnfP21237 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BdnfP21237 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
BdnfP21237 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BdnfP21237 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BdnfP21237 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BdnfP21237 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms