Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp53P15975 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp53P15975 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp53P15975 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp53P15975 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Gm18057-201ENSMUST00000208220 503 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp53P15975 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp53P15975 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Usp53P15975 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Sybu-209ENSMUST00000228639 4113 ntBASIC17.38■□□□□ 0.37
Usp53P15975 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp53P15975 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp53P15975 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.37■□□□□ 0.37
Usp53P15975 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.37■□□□□ 0.37
Usp53P15975 Gm43125-201ENSMUST00000201724 730 ntBASIC17.37■□□□□ 0.37
Usp53P15975 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.37■□□□□ 0.37
Usp53P15975 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.37■□□□□ 0.37
Usp53P15975 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp53P15975 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp53P15975 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp53P15975 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp53P15975 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.36■□□□□ 0.37
Usp53P15975 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.36■□□□□ 0.37
Usp53P15975 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp53P15975 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp53P15975 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.36■□□□□ 0.37
Usp53P15975 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.36■□□□□ 0.37
Usp53P15975 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp53P15975 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp53P15975 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Usp53P15975 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp53P15975 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Usp53P15975 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp53P15975 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp53P15975 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp53P15975 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.35■□□□□ 0.37
Usp53P15975 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp53P15975 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms