Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm27335-201ENSMUST00000184758 97 ntBASIC15.42■□□□□ 0.06
Rb1P13405 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rb1P13405 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.42■□□□□ 0.06
Rb1P13405 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Gm8396-201ENSMUST00000057361 823 ntBASIC15.42■□□□□ 0.06
Rb1P13405 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.42■□□□□ 0.06
Rb1P13405 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.42■□□□□ 0.06
Rb1P13405 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rb1P13405 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rb1P13405 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.41■□□□□ 0.06
Rb1P13405 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.41■□□□□ 0.06
Rb1P13405 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.41■□□□□ 0.06
Rb1P13405 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rb1P13405 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.41■□□□□ 0.06
Rb1P13405 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.41■□□□□ 0.06
Rb1P13405 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rb1P13405 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rb1P13405 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.4■□□□□ 0.06
Rb1P13405 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.4■□□□□ 0.06
Rb1P13405 Gm14701-201ENSMUST00000117156 348 ntBASIC15.4■□□□□ 0.06
Rb1P13405 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rb1P13405 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.4■□□□□ 0.06
Rb1P13405 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.4■□□□□ 0.06
Rb1P13405 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rb1P13405 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rb1P13405 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.06
Rb1P13405 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rb1P13405 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Rb1P13405 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.39■□□□□ 0.05
Rb1P13405 Gm4899-201ENSMUST00000178708 719 ntBASIC15.39■□□□□ 0.05
Rb1P13405 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.39■□□□□ 0.05
Rb1P13405 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.39■□□□□ 0.05
Rb1P13405 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.39■□□□□ 0.05
Rb1P13405 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rb1P13405 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rb1P13405 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Rb1P13405 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.38■□□□□ 0.05
Rb1P13405 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.38■□□□□ 0.05
Rb1P13405 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.38■□□□□ 0.05
Rb1P13405 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rb1P13405 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms