Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.19□□□□□ -0.3
P01800 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.19□□□□□ -0.3
P01800 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
P01800 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
P01800 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.19□□□□□ -0.3
P01800 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Mzt1-203ENSMUST00000227948 952 ntBASIC13.19□□□□□ -0.3
P01800 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.19□□□□□ -0.3
P01800 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
P01800 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01800 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
P01800 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P01800 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.18□□□□□ -0.3
P01800 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.18□□□□□ -0.3
P01800 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.18□□□□□ -0.3
P01800 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.18□□□□□ -0.3
P01800 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.18□□□□□ -0.3
P01800 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
P01800 Gm27867-201ENSMUST00000184778 125 ntBASIC13.18□□□□□ -0.3
P01800 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.18□□□□□ -0.3
P01800 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.18□□□□□ -0.3
P01800 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.18□□□□□ -0.3
P01800 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.18□□□□□ -0.3
P01800 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
P01800 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.18□□□□□ -0.3
P01800 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01800 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
P01800 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.17□□□□□ -0.3
P01800 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.17□□□□□ -0.3
P01800 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.17□□□□□ -0.3
P01800 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.17□□□□□ -0.3
P01800 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Gm8318-201ENSMUST00000182954 872 ntBASIC13.17□□□□□ -0.3
P01800 Gm27459-201ENSMUST00000184860 107 ntBASIC13.17□□□□□ -0.3
P01800 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.17□□□□□ -0.3
P01800 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Gm34391-201ENSMUST00000203706 907 ntBASIC13.17□□□□□ -0.3
P01800 Gm44771-201ENSMUST00000206975 626 ntBASIC13.17□□□□□ -0.3
P01800 Gm7506-201ENSMUST00000207758 815 ntBASIC13.17□□□□□ -0.3
P01800 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P01800 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.17□□□□□ -0.3
P01800 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
P01800 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P01800 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms