Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igh-VJ558P01758 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Igh-VJ558P01758 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13□□□□□ -0.33
Igh-VJ558P01758 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Gm42632-201ENSMUST00000201707 2411 ntBASIC13□□□□□ -0.33
Igh-VJ558P01758 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Igh-VJ558P01758 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Igh-VJ558P01758 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igh-VJ558P01758 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igh-VJ558P01758 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Gm12350-201ENSMUST00000121208 462 ntBASIC13□□□□□ -0.33
Igh-VJ558P01758 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Igh-VJ558P01758 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Gm18195-201ENSMUST00000207604 706 ntBASIC13□□□□□ -0.33
Igh-VJ558P01758 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13□□□□□ -0.33
Igh-VJ558P01758 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13□□□□□ -0.33
Igh-VJ558P01758 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igh-VJ558P01758 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Igh-VJ558P01758 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.99□□□□□ -0.33
Igh-VJ558P01758 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Igh-VJ558P01758 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Igh-VJ558P01758 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms