Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.45□□□□□ -0.1
Hcn1O88704 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Hcn1O88704 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.44□□□□□ -0.1
Hcn1O88704 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hcn1O88704 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Hcn1O88704 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hcn1O88704 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hcn1O88704 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.44□□□□□ -0.1
Hcn1O88704 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.44□□□□□ -0.1
Hcn1O88704 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.44□□□□□ -0.1
Hcn1O88704 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.44□□□□□ -0.1
Hcn1O88704 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.44□□□□□ -0.1
Hcn1O88704 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hcn1O88704 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.44□□□□□ -0.1
Hcn1O88704 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hcn1O88704 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.44□□□□□ -0.1
Hcn1O88704 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Gm27646-201ENSMUST00000183989 110 ntBASIC14.43□□□□□ -0.1
Hcn1O88704 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.43□□□□□ -0.1
Hcn1O88704 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.43□□□□□ -0.1
Hcn1O88704 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hcn1O88704 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hcn1O88704 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.42□□□□□ -0.1
Hcn1O88704 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.42□□□□□ -0.1
Hcn1O88704 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hcn1O88704 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.42□□□□□ -0.1
Hcn1O88704 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.42□□□□□ -0.1
Hcn1O88704 Gm6550-201ENSMUST00000187574 993 ntBASIC14.42□□□□□ -0.1
Hcn1O88704 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.42□□□□□ -0.1
Hcn1O88704 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.42□□□□□ -0.1
Hcn1O88704 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hcn1O88704 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.42□□□□□ -0.1
Hcn1O88704 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hcn1O88704 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hcn1O88704 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hcn1O88704 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hcn1O88704 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hcn1O88704 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms