Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a20bO88575 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Slc6a20bO88575 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc6a20bO88575 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20bO88575 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20bO88575 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20bO88575 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20bO88575 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.21
Slc6a20bO88575 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc6a20bO88575 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Gm9522-201ENSMUST00000182394 926 ntBASIC16.33■□□□□ 0.2
Slc6a20bO88575 Gm43630-201ENSMUST00000201550 776 ntBASIC16.33■□□□□ 0.2
Slc6a20bO88575 Gm6007-201ENSMUST00000208170 823 ntBASIC16.33■□□□□ 0.2
Slc6a20bO88575 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.33■□□□□ 0.2
Slc6a20bO88575 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc6a20bO88575 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Mir1938-201ENSMUST00000158746 100 ntBASIC16.32■□□□□ 0.2
Slc6a20bO88575 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc6a20bO88575 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Gm15824-201ENSMUST00000119516 955 ntBASIC16.31■□□□□ 0.2
Slc6a20bO88575 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Gm37917-201ENSMUST00000194711 392 ntBASIC16.31■□□□□ 0.2
Slc6a20bO88575 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.31■□□□□ 0.2
Slc6a20bO88575 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc6a20bO88575 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Gm15653-201ENSMUST00000119247 907 ntBASIC16.3■□□□□ 0.2
Slc6a20bO88575 Gm5479-201ENSMUST00000160578 435 ntBASIC16.3■□□□□ 0.2
Slc6a20bO88575 Gm16476-201ENSMUST00000221544 139 ntBASIC16.3■□□□□ 0.2
Slc6a20bO88575 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.3■□□□□ 0.2
Slc6a20bO88575 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc6a20bO88575 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms