Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.31■□□□□ 0.52
Cops6O88545 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.3■□□□□ 0.52
Cops6O88545 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cops6O88545 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cops6O88545 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cops6O88545 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Gm13453-201ENSMUST00000118708 357 ntBASIC18.3■□□□□ 0.52
Cops6O88545 Gm27989-201ENSMUST00000184721 107 ntBASIC18.3■□□□□ 0.52
Cops6O88545 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.3■□□□□ 0.52
Cops6O88545 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Cops6O88545 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cops6O88545 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cops6O88545 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cops6O88545 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Cops6O88545 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cops6O88545 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.29■□□□□ 0.52
Cops6O88545 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cops6O88545 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Gm12428-201ENSMUST00000119844 727 ntBASIC18.29■□□□□ 0.52
Cops6O88545 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.29■□□□□ 0.52
Cops6O88545 Gm5479-201ENSMUST00000160578 435 ntBASIC18.29■□□□□ 0.52
Cops6O88545 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.29■□□□□ 0.52
Cops6O88545 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cops6O88545 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
Cops6O88545 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cops6O88545 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cops6O88545 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.28■□□□□ 0.52
Cops6O88545 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.28■□□□□ 0.52
Cops6O88545 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.28■□□□□ 0.52
Cops6O88545 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.28■□□□□ 0.52
Cops6O88545 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.28■□□□□ 0.52
Cops6O88545 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Cops6O88545 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cops6O88545 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
Cops6O88545 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops6O88545 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cops6O88545 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.27■□□□□ 0.52
Cops6O88545 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.27■□□□□ 0.52
Cops6O88545 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops6O88545 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops6O88545 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops6O88545 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cops6O88545 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cops6O88545 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms