Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vti1bO88384 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vti1bO88384 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1bO88384 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vti1bO88384 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1bO88384 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Vti1bO88384 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1bO88384 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.37□□□□□ -0.11
Vti1bO88384 Gm43347-201ENSMUST00000200226 580 ntBASIC14.37□□□□□ -0.11
Vti1bO88384 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.37□□□□□ -0.11
Vti1bO88384 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.37□□□□□ -0.11
Vti1bO88384 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.37□□□□□ -0.11
Vti1bO88384 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Vti1bO88384 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1bO88384 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.36□□□□□ -0.11
Vti1bO88384 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Gm7153-201ENSMUST00000117092 455 ntBASIC14.36□□□□□ -0.11
Vti1bO88384 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Gm8655-201ENSMUST00000221159 852 ntBASIC14.36□□□□□ -0.11
Vti1bO88384 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vti1bO88384 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vti1bO88384 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1bO88384 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Vti1bO88384 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Vti1bO88384 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Vti1bO88384 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.35□□□□□ -0.11
Vti1bO88384 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.35□□□□□ -0.11
Vti1bO88384 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.35□□□□□ -0.11
Vti1bO88384 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.35□□□□□ -0.11
Vti1bO88384 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vti1bO88384 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vti1bO88384 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1bO88384 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.34□□□□□ -0.11
Vti1bO88384 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.34□□□□□ -0.11
Vti1bO88384 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Vti1bO88384 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Vti1bO88384 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1bO88384 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.34□□□□□ -0.11
Vti1bO88384 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Vti1bO88384 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms