Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.73■□□□□ 0.43
Slc4a4O88343 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc4a4O88343 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Slc4a4O88343 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.72■□□□□ 0.43
Slc4a4O88343 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.72■□□□□ 0.43
Slc4a4O88343 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Slc4a4O88343 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Slc4a4O88343 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Slc4a4O88343 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc4a4O88343 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Slc4a4O88343 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Slc4a4O88343 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Slc4a4O88343 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.71■□□□□ 0.43
Slc4a4O88343 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc4a4O88343 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.71■□□□□ 0.43
Slc4a4O88343 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc4a4O88343 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Slc4a4O88343 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Slc4a4O88343 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc4a4O88343 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Slc4a4O88343 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.7■□□□□ 0.42
Slc4a4O88343 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc4a4O88343 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Slc4a4O88343 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.7■□□□□ 0.42
Slc4a4O88343 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc4a4O88343 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Slc4a4O88343 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc4a4O88343 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc4a4O88343 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms