Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim1O70400 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Gm17968-201ENSMUST00000194902 784 ntBASIC14.84□□□□□ -0.03
Pdlim1O70400 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.84□□□□□ -0.03
Pdlim1O70400 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pdlim1O70400 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim1O70400 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim1O70400 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim1O70400 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Pdlim1O70400 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim1O70400 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdlim1O70400 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Gm16198-201ENSMUST00000118766 670 ntBASIC14.83□□□□□ -0.04
Pdlim1O70400 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.83□□□□□ -0.04
Pdlim1O70400 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdlim1O70400 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.83□□□□□ -0.04
Pdlim1O70400 Gm45747-201ENSMUST00000212203 999 ntBASIC14.83□□□□□ -0.04
Pdlim1O70400 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.83□□□□□ -0.04
Pdlim1O70400 Gm10154-201ENSMUST00000084445 354 ntBASIC14.83□□□□□ -0.04
Pdlim1O70400 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pdlim1O70400 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdlim1O70400 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim1O70400 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.82□□□□□ -0.04
Pdlim1O70400 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.82□□□□□ -0.04
Pdlim1O70400 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.82□□□□□ -0.04
Pdlim1O70400 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
Pdlim1O70400 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim1O70400 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pdlim1O70400 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.81□□□□□ -0.04
Pdlim1O70400 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms