Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdlim3O70209 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdlim3O70209 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pdlim3O70209 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.65□□□□□ -0.22
Pdlim3O70209 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdlim3O70209 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pdlim3O70209 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Olfr129-201ENSMUST00000122318 993 ntBASIC13.64□□□□□ -0.23
Pdlim3O70209 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Gm10231-201ENSMUST00000181584 441 ntBASIC13.64□□□□□ -0.23
Pdlim3O70209 Gm8318-201ENSMUST00000182954 872 ntBASIC13.64□□□□□ -0.23
Pdlim3O70209 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Gm10175-202ENSMUST00000208752 441 ntBASIC13.64□□□□□ -0.23
Pdlim3O70209 Gm10252-201ENSMUST00000209541 832 ntBASIC13.64□□□□□ -0.23
Pdlim3O70209 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.64□□□□□ -0.23
Pdlim3O70209 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pdlim3O70209 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Gm15165-201ENSMUST00000118140 502 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Gm4459-201ENSMUST00000118750 468 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Gm12497-201ENSMUST00000138778 237 ntBASIC13.63□□□□□ -0.23
Pdlim3O70209 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pdlim3O70209 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.63□□□□□ -0.23
Pdlim3O70209 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms