Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rdh5O55240 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Rdh5O55240 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rdh5O55240 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.25□□□□□ -0.13
Rdh5O55240 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.25□□□□□ -0.13
Rdh5O55240 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.25□□□□□ -0.13
Rdh5O55240 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rdh5O55240 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.25□□□□□ -0.13
Rdh5O55240 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.25□□□□□ -0.13
Rdh5O55240 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.25□□□□□ -0.13
Rdh5O55240 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rdh5O55240 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rdh5O55240 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Rdh5O55240 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rdh5O55240 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rdh5O55240 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.24□□□□□ -0.13
Rdh5O55240 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rdh5O55240 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Rdh5O55240 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.24□□□□□ -0.13
Rdh5O55240 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.24□□□□□ -0.13
Rdh5O55240 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.24□□□□□ -0.13
Rdh5O55240 Gm4899-201ENSMUST00000178708 719 ntBASIC14.24□□□□□ -0.13
Rdh5O55240 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.24□□□□□ -0.13
Rdh5O55240 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.24□□□□□ -0.13
Rdh5O55240 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rdh5O55240 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rdh5O55240 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Rdh5O55240 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Gm13036-201ENSMUST00000117799 748 ntBASIC14.23□□□□□ -0.13
Rdh5O55240 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.23□□□□□ -0.13
Rdh5O55240 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms