Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pja1O55176 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.9■□□□□ 0.14
Pja1O55176 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pja1O55176 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Gm11780-201ENSMUST00000136880 516 ntBASIC15.9■□□□□ 0.14
Pja1O55176 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Gm33142-201ENSMUST00000193913 867 ntBASIC15.9■□□□□ 0.14
Pja1O55176 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.9■□□□□ 0.14
Pja1O55176 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pja1O55176 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pja1O55176 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pja1O55176 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pja1O55176 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.89■□□□□ 0.13
Pja1O55176 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.89■□□□□ 0.13
Pja1O55176 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Pja1O55176 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Gm12008-201ENSMUST00000117791 755 ntBASIC15.89■□□□□ 0.13
Pja1O55176 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pja1O55176 Gm43767-201ENSMUST00000198933 381 ntBASIC15.89■□□□□ 0.13
Pja1O55176 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.89■□□□□ 0.13
Pja1O55176 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pja1O55176 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pja1O55176 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.89■□□□□ 0.13
Pja1O55176 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.89■□□□□ 0.13
Pja1O55176 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pja1O55176 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Pja1O55176 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pja1O55176 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.89■□□□□ 0.13
Pja1O55176 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pja1O55176 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Gm12644-201ENSMUST00000119935 606 ntBASIC15.88■□□□□ 0.13
Pja1O55176 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.88■□□□□ 0.13
Pja1O55176 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.88■□□□□ 0.13
Pja1O55176 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.88■□□□□ 0.13
Pja1O55176 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.88■□□□□ 0.13
Pja1O55176 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pja1O55176 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pja1O55176 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pja1O55176 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.87■□□□□ 0.13
Pja1O55176 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.87■□□□□ 0.13
Pja1O55176 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pja1O55176 Mir7071-201ENSMUST00000184847 69 ntBASIC15.87■□□□□ 0.13
Pja1O55176 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Pja1O55176 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.87■□□□□ 0.13
Pja1O55176 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.87■□□□□ 0.13
Pja1O55176 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms