Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rpl35aO55142 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rpl35aO55142 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm11779-201ENSMUST00000118541 368 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm27300-201ENSMUST00000184085 97 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm27335-201ENSMUST00000184758 97 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm2213-201ENSMUST00000197485 688 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.22□□□□□ -0.61
Rpl35aO55142 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.22□□□□□ -0.61
Rpl35aO55142 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rpl35aO55142 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.21□□□□□ -0.61
Rpl35aO55142 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rpl35aO55142 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.21□□□□□ -0.61
Rpl35aO55142 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Rpl35aO55142 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Gm9727-201ENSMUST00000161387 555 ntBASIC11.21□□□□□ -0.61
Rpl35aO55142 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.21□□□□□ -0.61
Rpl35aO55142 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rpl35aO55142 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Rpl35aO55142 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rpl35aO55142 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Rpl35aO55142 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rpl35aO55142 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rpl35aO55142 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rpl35aO55142 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rpl35aO55142 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rpl35aO55142 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.2□□□□□ -0.62
Rpl35aO55142 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rpl35aO55142 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms