Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SncaO55042 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SncaO55042 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SncaO55042 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SncaO55042 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.47□□□□□ -0.41
SncaO55042 Gm12497-201ENSMUST00000138778 237 ntBASIC12.47□□□□□ -0.41
SncaO55042 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
SncaO55042 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
SncaO55042 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
SncaO55042 Mir7071-201ENSMUST00000184847 69 ntBASIC12.47□□□□□ -0.41
SncaO55042 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SncaO55042 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.47□□□□□ -0.41
SncaO55042 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.47□□□□□ -0.41
SncaO55042 Gm18622-201ENSMUST00000219361 595 ntBASIC12.47□□□□□ -0.41
SncaO55042 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SncaO55042 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SncaO55042 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SncaO55042 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.46□□□□□ -0.41
SncaO55042 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SncaO55042 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
SncaO55042 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.46□□□□□ -0.41
SncaO55042 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.46□□□□□ -0.41
SncaO55042 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.46□□□□□ -0.41
SncaO55042 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.46□□□□□ -0.41
SncaO55042 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.46□□□□□ -0.41
SncaO55042 Gm13836-201ENSMUST00000121159 501 ntBASIC12.46□□□□□ -0.41
SncaO55042 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SncaO55042 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.46□□□□□ -0.41
SncaO55042 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SncaO55042 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SncaO55042 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SncaO55042 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
SncaO55042 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.46□□□□□ -0.42
SncaO55042 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SncaO55042 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SncaO55042 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SncaO55042 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SncaO55042 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.45□□□□□ -0.42
SncaO55042 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SncaO55042 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms