Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.9■□□□□ 0.46
Smarce1O54941 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smarce1O54941 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarce1O54941 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smarce1O54941 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smarce1O54941 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.89■□□□□ 0.45
Smarce1O54941 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.89■□□□□ 0.45
Smarce1O54941 Gm27646-201ENSMUST00000183989 110 ntBASIC17.89■□□□□ 0.45
Smarce1O54941 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.89■□□□□ 0.45
Smarce1O54941 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.89■□□□□ 0.45
Smarce1O54941 Gm6296-201ENSMUST00000222599 943 ntBASIC17.89■□□□□ 0.45
Smarce1O54941 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Smarce1O54941 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.89■□□□□ 0.45
Smarce1O54941 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Smarce1O54941 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarce1O54941 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smarce1O54941 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smarce1O54941 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Smarce1O54941 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Gm10499-201ENSMUST00000174094 934 ntBASIC17.88■□□□□ 0.45
Smarce1O54941 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Smarce1O54941 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarce1O54941 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
Smarce1O54941 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Smarce1O54941 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.87■□□□□ 0.45
Smarce1O54941 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smarce1O54941 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.87■□□□□ 0.45
Smarce1O54941 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarce1O54941 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smarce1O54941 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarce1O54941 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Gm17807-201ENSMUST00000186869 298 ntBASIC17.86■□□□□ 0.45
Smarce1O54941 Gm43767-201ENSMUST00000198933 381 ntBASIC17.86■□□□□ 0.45
Smarce1O54941 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarce1O54941 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms