Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Dkk1O54908 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.48□□□□□ -0.25
Dkk1O54908 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Dancr-204ENSMUST00000132389 2347 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Gm42968-201ENSMUST00000198578 1372 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Dkk1O54908 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC13.47□□□□□ -0.25
Dkk1O54908 Gm25037-201ENSMUST00000175418 110 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Gm4535-201ENSMUST00000182274 558 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 Gm27005-201ENSMUST00000182783 921 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 Gm18799-201ENSMUST00000189104 913 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Dkk1O54908 Gm10355-201ENSMUST00000097146 517 ntBASIC13.47□□□□□ -0.25
Dkk1O54908 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Dkk1O54908 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Dkk1O54908 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.47□□□□□ -0.25
Dkk1O54908 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Dkk1O54908 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Dkk1O54908 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.46□□□□□ -0.25
Dkk1O54908 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Dkk1O54908 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.46□□□□□ -0.25
Dkk1O54908 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Cfhr3-201ENSMUST00000170441 1022 ntBASIC13.46□□□□□ -0.25
Dkk1O54908 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm37599-201ENSMUST00000193067 489 ntBASIC13.46□□□□□ -0.25
Dkk1O54908 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.46□□□□□ -0.25
Dkk1O54908 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC13.46□□□□□ -0.25
Dkk1O54908 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.46□□□□□ -0.25
Dkk1O54908 Rps4l-201ENSMUST00000071745 943 ntBASIC13.46□□□□□ -0.25
Dkk1O54908 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Dkk1O54908 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.46□□□□□ -0.25
Dkk1O54908 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dkk1O54908 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Dkk1O54908 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dkk1O54908 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.45□□□□□ -0.26
Dkk1O54908 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Dkk1O54908 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dkk1O54908 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms