Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Limk2O54785 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.25■□□□□ 0.03
Limk2O54785 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.25■□□□□ 0.03
Limk2O54785 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.25■□□□□ 0.03
Limk2O54785 Gm44872-201ENSMUST00000207864 420 ntBASIC15.25■□□□□ 0.03
Limk2O54785 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.25■□□□□ 0.03
Limk2O54785 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.25■□□□□ 0.03
Limk2O54785 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.25■□□□□ 0.03
Limk2O54785 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.25■□□□□ 0.03
Limk2O54785 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.25■□□□□ 0.03
Limk2O54785 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.25■□□□□ 0.03
Limk2O54785 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.25■□□□□ 0.03
Limk2O54785 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Limk2O54785 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Limk2O54785 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.24■□□□□ 0.03
Limk2O54785 Gm14057-201ENSMUST00000120631 482 ntBASIC15.24■□□□□ 0.03
Limk2O54785 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Limk2O54785 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Limk2O54785 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Limk2O54785 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.24■□□□□ 0.03
Limk2O54785 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Limk2O54785 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Limk2O54785 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.23■□□□□ 0.03
Limk2O54785 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.23■□□□□ 0.03
Limk2O54785 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Limk2O54785 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.23■□□□□ 0.03
Limk2O54785 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.23■□□□□ 0.03
Limk2O54785 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.23■□□□□ 0.03
Limk2O54785 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.23■□□□□ 0.03
Limk2O54785 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.23■□□□□ 0.03
Limk2O54785 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.23■□□□□ 0.03
Limk2O54785 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Gm8396-201ENSMUST00000057361 823 ntBASIC15.23■□□□□ 0.03
Limk2O54785 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Limk2O54785 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Limk2O54785 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Limk2O54785 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Limk2O54785 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms