Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm23243-201ENSMUST00000180047 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24659-201ENSMUST00000180212 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm24169-201ENSMUST00000180244 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm23689-201ENSMUST00000180354 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm27359-201ENSMUST00000184153 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm27785-201ENSMUST00000184268 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm27466-201ENSMUST00000184396 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm27703-201ENSMUST00000184836 110 ntBASIC16.28■□□□□ 0.2
Per1O35973 Gm43125-201ENSMUST00000201724 730 ntBASIC16.28■□□□□ 0.2
Per1O35973 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.28■□□□□ 0.2
Per1O35973 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Per1O35973 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.28■□□□□ 0.2
Per1O35973 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Per1O35973 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.28■□□□□ 0.2
Per1O35973 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Per1O35973 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Per1O35973 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Per1O35973 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Per1O35973 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Per1O35973 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.27■□□□□ 0.2
Per1O35973 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Per1O35973 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.27■□□□□ 0.2
Per1O35973 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Per1O35973 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.27■□□□□ 0.2
Per1O35973 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Per1O35973 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.27■□□□□ 0.2
Per1O35973 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.27■□□□□ 0.2
Per1O35973 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Per1O35973 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Per1O35973 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.27■□□□□ 0.19
Per1O35973 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Per1O35973 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Per1O35973 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.26■□□□□ 0.19
Per1O35973 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Gm5479-201ENSMUST00000160578 435 ntBASIC16.26■□□□□ 0.19
Per1O35973 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.26■□□□□ 0.19
Per1O35973 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.26■□□□□ 0.19
Per1O35973 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Per1O35973 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Per1O35973 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Per1O35973 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Per1O35973 Gm14701-201ENSMUST00000117156 348 ntBASIC16.25■□□□□ 0.19
Per1O35973 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
Per1O35973 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.25■□□□□ 0.19
Per1O35973 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Per1O35973 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.25■□□□□ 0.19
Per1O35973 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Per1O35973 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms