Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Gm15937-201ENSMUST00000120727 1235 ntBASIC16.39■□□□□ 0.21
Clcn6O35454 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn6O35454 Gm43787-201ENSMUST00000197792 1037 ntBASIC16.39■□□□□ 0.21
Clcn6O35454 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Clcn6O35454 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Clcn6O35454 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn6O35454 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Clcn6O35454 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Clcn6O35454 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Gm6345-202ENSMUST00000180900 204 ntBASIC16.38■□□□□ 0.21
Clcn6O35454 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clcn6O35454 Gm45636-201ENSMUST00000210497 1064 ntBASIC16.38■□□□□ 0.21
Clcn6O35454 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.38■□□□□ 0.21
Clcn6O35454 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC16.38■□□□□ 0.21
Clcn6O35454 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clcn6O35454 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.38■□□□□ 0.21
Clcn6O35454 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.38■□□□□ 0.21
Clcn6O35454 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn6O35454 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clcn6O35454 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.37■□□□□ 0.21
Clcn6O35454 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.37■□□□□ 0.21
Clcn6O35454 Gm22985-201ENSMUST00000122754 116 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Clcn6O35454 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Gm38047-201ENSMUST00000193690 1133 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Gm37452-201ENSMUST00000194416 1160 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Gm29707-201ENSMUST00000196325 491 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Gm42430-201ENSMUST00000197209 616 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Gm42964-201ENSMUST00000202965 382 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 AC069561.1-201ENSMUST00000213750 424 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Gm18242-201ENSMUST00000218455 542 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC16.37■□□□□ 0.21
Clcn6O35454 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn6O35454 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC16.37■□□□□ 0.21
Clcn6O35454 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Clcn6O35454 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clcn6O35454 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clcn6O35454 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Clcn6O35454 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clcn6O35454 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn6O35454 Gm12073-201ENSMUST00000117382 524 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms