Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.4■□□□□ 0.06
Ercc2O08811 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.4■□□□□ 0.06
Ercc2O08811 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc2O08811 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.4■□□□□ 0.06
Ercc2O08811 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ercc2O08811 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Ercc2O08811 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.39■□□□□ 0.05
Ercc2O08811 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.39■□□□□ 0.05
Ercc2O08811 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.39■□□□□ 0.05
Ercc2O08811 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Ercc2O08811 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.39■□□□□ 0.05
Ercc2O08811 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ercc2O08811 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ercc2O08811 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ercc2O08811 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.38■□□□□ 0.05
Ercc2O08811 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ercc2O08811 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Gm12008-201ENSMUST00000117791 755 ntBASIC15.38■□□□□ 0.05
Ercc2O08811 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ercc2O08811 Gm18206-201ENSMUST00000207027 926 ntBASIC15.38■□□□□ 0.05
Ercc2O08811 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ercc2O08811 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.38■□□□□ 0.05
Ercc2O08811 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.38■□□□□ 0.05
Ercc2O08811 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Ercc2O08811 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ercc2O08811 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ercc2O08811 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ercc2O08811 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.37■□□□□ 0.05
Ercc2O08811 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.37■□□□□ 0.05
Ercc2O08811 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.37■□□□□ 0.05
Ercc2O08811 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.37■□□□□ 0.05
Ercc2O08811 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ercc2O08811 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.37■□□□□ 0.05
Ercc2O08811 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Ercc2O08811 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.37■□□□□ 0.05
Ercc2O08811 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Ercc2O08811 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms