Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Ube3aO08759 Gm44454-201ENSMUST00000198541 138 ntBASIC16.29■□□□□ 0.2
Ube3aO08759 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube3aO08759 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ube3aO08759 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube3aO08759 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ube3aO08759 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube3aO08759 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ube3aO08759 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ube3aO08759 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.28■□□□□ 0.2
Ube3aO08759 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Ube3aO08759 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ube3aO08759 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ube3aO08759 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ube3aO08759 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ube3aO08759 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.27■□□□□ 0.2
Ube3aO08759 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.27■□□□□ 0.2
Ube3aO08759 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ube3aO08759 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.27■□□□□ 0.2
Ube3aO08759 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.27■□□□□ 0.2
Ube3aO08759 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.27■□□□□ 0.2
Ube3aO08759 Mir3081-201ENSMUST00000175305 84 ntBASIC16.27■□□□□ 0.2
Ube3aO08759 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.27■□□□□ 0.2
Ube3aO08759 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ube3aO08759 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ube3aO08759 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ube3aO08759 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ube3aO08759 Grk6-207ENSMUST00000225925 2769 ntBASIC16.26■□□□□ 0.19
Ube3aO08759 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ube3aO08759 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ube3aO08759 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ube3aO08759 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.26■□□□□ 0.19
Ube3aO08759 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ube3aO08759 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.26■□□□□ 0.19
Ube3aO08759 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms