Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1bO08603 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1bO08603 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Raet1bO08603 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Raet1bO08603 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Raet1bO08603 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Raet1bO08603 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.34□□□□□ -0.27
Raet1bO08603 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Raet1bO08603 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Raet1bO08603 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Raet1bO08603 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Raet1bO08603 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Raet1bO08603 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Raet1bO08603 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Raet1bO08603 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.33□□□□□ -0.28
Raet1bO08603 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.33□□□□□ -0.28
Raet1bO08603 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Raet1bO08603 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.33□□□□□ -0.28
Raet1bO08603 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.33□□□□□ -0.28
Raet1bO08603 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Raet1bO08603 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Raet1bO08603 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Raet1bO08603 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Raet1bO08603 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.33□□□□□ -0.28
Raet1bO08603 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Raet1bO08603 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.33□□□□□ -0.28
Raet1bO08603 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Raet1bO08603 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.32□□□□□ -0.28
Raet1bO08603 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Mir5126-201ENSMUST00000175513 77 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Raet1bO08603 Gm43767-201ENSMUST00000198933 381 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.32□□□□□ -0.28
Raet1bO08603 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Raet1bO08603 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.32□□□□□ -0.28
Raet1bO08603 Gm18246-201ENSMUST00000221023 728 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.32□□□□□ -0.28
Raet1bO08603 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms