Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Gm6433-201ENSMUST00000118634 875 ntBASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Gm14722-201ENSMUST00000118943 689 ntBASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Gm15794-201ENSMUST00000120182 631 ntBASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shisa8J3QNX5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Gm9013-201ENSMUST00000132939 882 ntBASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shisa8J3QNX5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms