Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm3727J3QM54 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3727J3QM54 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3727J3QM54 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3727J3QM54 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3727J3QM54 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm12441-201ENSMUST00000121806 588 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm16061-201ENSMUST00000122167 857 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.8□□□□□ -0.36
Gm3727J3QM54 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3727J3QM54 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.79□□□□□ -0.36
Gm3727J3QM54 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.79□□□□□ -0.36
Gm3727J3QM54 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.79□□□□□ -0.36
Gm3727J3QM54 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.79□□□□□ -0.36
Gm3727J3QM54 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3727J3QM54 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.78□□□□□ -0.36
Gm3727J3QM54 Carlr-201ENSMUST00000181515 2574 ntBASIC12.78□□□□□ -0.36
Gm3727J3QM54 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3727J3QM54 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
Gm3727J3QM54 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms