Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.05■□□□□ 0.48
NpcdF8VQB8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Mir6420-201ENSMUST00000185032 102 ntBASIC18.05■□□□□ 0.48
NpcdF8VQB8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Gm12138-201ENSMUST00000122180 951 ntBASIC18.04■□□□□ 0.48
NpcdF8VQB8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NpcdF8VQB8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gm6266-201ENSMUST00000203844 806 ntBASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gm9908-201ENSMUST00000211534 448 ntBASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC18.03■□□□□ 0.48
NpcdF8VQB8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.03■□□□□ 0.48
NpcdF8VQB8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.03■□□□□ 0.48
NpcdF8VQB8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.03■□□□□ 0.48
NpcdF8VQB8 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.03■□□□□ 0.48
NpcdF8VQB8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.02■□□□□ 0.48
NpcdF8VQB8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.02■□□□□ 0.48
NpcdF8VQB8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NpcdF8VQB8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NpcdF8VQB8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms