Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.08■□□□□ 0.01
Ccdc188F6WEU2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc188F6WEU2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Gm29127-201ENSMUST00000188304 517 ntBASIC15.08■□□□□ 0
Ccdc188F6WEU2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.08■□□□□ 0
Ccdc188F6WEU2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc188F6WEU2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Gm27847-201ENSMUST00000183711 107 ntBASIC15.07■□□□□ 0
Ccdc188F6WEU2 Gm27375-201ENSMUST00000183799 107 ntBASIC15.07■□□□□ 0
Ccdc188F6WEU2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Gm45880-201ENSMUST00000213041 853 ntBASIC15.07■□□□□ 0
Ccdc188F6WEU2 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.07■□□□□ 0
Ccdc188F6WEU2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.07■□□□□ 0
Ccdc188F6WEU2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc188F6WEU2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Gm15782-201ENSMUST00000121073 445 ntBASIC15.06■□□□□ 0
Ccdc188F6WEU2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Gm45930-201ENSMUST00000221330 292 ntBASIC15.06■□□□□ 0
Ccdc188F6WEU2 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.06■□□□□ 0
Ccdc188F6WEU2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc188F6WEU2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc188F6WEU2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc188F6WEU2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc188F6WEU2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc188F6WEU2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Gm2495-201ENSMUST00000191160 466 ntBASIC15.05■□□□□ -0
Ccdc188F6WEU2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Gm7783-201ENSMUST00000204795 781 ntBASIC15.05■□□□□ -0
Ccdc188F6WEU2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc188F6WEU2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms