Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gm5356-201ENSMUST00000093326 615 ntBASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scaf11E9PZM7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scaf11E9PZM7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scaf11E9PZM7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Gm27839-201ENSMUST00000184242 106 ntBASIC20.7■□□□□ 0.9
Scaf11E9PZM7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scaf11E9PZM7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Gm17420-201ENSMUST00000164753 153 ntBASIC20.69■□□□□ 0.9
Scaf11E9PZM7 Gm37424-201ENSMUST00000191727 561 ntBASIC20.69■□□□□ 0.9
Scaf11E9PZM7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Gm5354-201ENSMUST00000182417 973 ntBASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Gm7558-201ENSMUST00000193221 1165 ntBASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scaf11E9PZM7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.67■□□□□ 0.9
Scaf11E9PZM7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms