Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gm11543-201ENSMUST00000120758 370 ntBASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gm27430-201ENSMUST00000184585 107 ntBASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gm44333-201ENSMUST00000197168 107 ntBASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Srp54bE9PXC0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Gm25287-201ENSMUST00000103846 110 ntBASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Gm22918-201ENSMUST00000103855 110 ntBASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Gm22175-201ENSMUST00000175007 78 ntBASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Gm7063-201ENSMUST00000186840 981 ntBASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srp54bE9PXC0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.78□□□□□ -0.04
Srp54bE9PXC0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms