Protein–RNA interactions for Protein: E9PUP1

Syde2, Synapse defective 1, Rho GTPase, homolog 2 (C. elegans), mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syde2E9PUP1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Gm15321-201ENSMUST00000121290 288 ntBASIC18.69■□□□□ 0.58
Syde2E9PUP1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Gm9719-201ENSMUST00000162765 543 ntBASIC18.69■□□□□ 0.58
Syde2E9PUP1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Syde2E9PUP1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Gm5566-201ENSMUST00000116118 459 ntBASIC18.68■□□□□ 0.58
Syde2E9PUP1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syde2E9PUP1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Syde2E9PUP1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Gm24543-201ENSMUST00000103867 82 ntBASIC18.67■□□□□ 0.58
Syde2E9PUP1 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Gm27838-201ENSMUST00000184829 128 ntBASIC18.67■□□□□ 0.58
Syde2E9PUP1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syde2E9PUP1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.66■□□□□ 0.58
Syde2E9PUP1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syde2E9PUP1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Syde2E9PUP1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.65■□□□□ 0.58
Syde2E9PUP1 Gm7653-201ENSMUST00000214567 508 ntBASIC18.65■□□□□ 0.58
Syde2E9PUP1 Gm6218-201ENSMUST00000219812 628 ntBASIC18.65■□□□□ 0.58
Syde2E9PUP1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syde2E9PUP1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms