Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Gm28911-201ENSMUST00000188837 117 ntBASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Gm7558-201ENSMUST00000193221 1165 ntBASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 AC166349.1-201ENSMUST00000220866 695 ntBASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Gm9182-201ENSMUST00000217829 639 ntBASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hfm1D3Z4R1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hfm1D3Z4R1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 AC154846.1-201ENSMUST00000226278 862 ntBASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hfm1D3Z4R1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Gm5303-201ENSMUST00000117943 1252 ntBASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Mir7654-201ENSMUST00000185082 70 ntBASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hfm1D3Z4R1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Gm4984-201ENSMUST00000115987 360 ntBASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hfm1D3Z4R1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 Gm33320-201ENSMUST00000192232 530 ntBASIC20.79■□□□□ 0.92
Hfm1D3Z4R1 AC123645.1-201ENSMUST00000228469 605 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms