Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Gm14719-201ENSMUST00000121891 340 ntBASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Gm43767-201ENSMUST00000198933 381 ntBASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn2B2RVW2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gm43438-201ENSMUST00000198133 379 ntBASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.35■□□□□ 0.37
Clrn2B2RVW2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.35■□□□□ 0.37
Clrn2B2RVW2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Celf4-206ENSMUST00000224553 1729 ntBASIC17.34■□□□□ 0.37
Clrn2B2RVW2 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn2B2RVW2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.33■□□□□ 0.37
Clrn2B2RVW2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn2B2RVW2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Syt7-204ENSMUST00000223586 1344 ntBASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Gm7488-201ENSMUST00000117148 684 ntBASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Gm27680-201ENSMUST00000184192 160 ntBASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clrn2B2RVW2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms