Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usf3B2RUQ2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Gm45167-201ENSMUST00000208007 322 ntBASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usf3B2RUQ2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usf3B2RUQ2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.55□□□□□ -0.4
Usf3B2RUQ2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms