Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Carlr-201ENSMUST00000181515 2574 ntBASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gm12887B1AVM1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Gm12008-201ENSMUST00000117791 755 ntBASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Gm27389-201ENSMUST00000183622 195 ntBASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.19□□□□□ -0.46
Gm12887B1AVM1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm12887B1AVM1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm12887B1AVM1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Gm25406-201ENSMUST00000157599 105 ntBASIC12.17□□□□□ -0.46
Gm12887B1AVM1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm12887B1AVM1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm12887B1AVM1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms