Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm10275-202ENSMUST00000168697 495 ntBASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm19220-201ENSMUST00000222682 803 ntBASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm10275-201ENSMUST00000092620 635 ntBASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col4a6B1AVK5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm11918-201ENSMUST00000121660 179 ntBASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.25■□□□□ 0.03
Col4a6B1AVK5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm17150-201ENSMUST00000165577 381 ntBASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm6266-201ENSMUST00000203844 806 ntBASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col4a6B1AVK5 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Gm33320-201ENSMUST00000192232 530 ntBASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col4a6B1AVK5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Mir1938-201ENSMUST00000158746 100 ntBASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Mir6420-201ENSMUST00000185032 102 ntBASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Gm9182-201ENSMUST00000217829 639 ntBASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col4a6B1AVK5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms