Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm5640A3KG49 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm5640A3KG49 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.27■□□□□ 0.04
Gm5640A3KG49 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Gm25406-201ENSMUST00000157599 105 ntBASIC15.27■□□□□ 0.04
Gm5640A3KG49 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Mir5130-201ENSMUST00000175160 84 ntBASIC15.27■□□□□ 0.04
Gm5640A3KG49 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Gm5640A3KG49 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.27■□□□□ 0.03
Gm5640A3KG49 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.27■□□□□ 0.03
Gm5640A3KG49 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Gm5640A3KG49 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Gm27389-201ENSMUST00000183622 195 ntBASIC15.26■□□□□ 0.03
Gm5640A3KG49 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.26■□□□□ 0.03
Gm5640A3KG49 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.26■□□□□ 0.03
Gm5640A3KG49 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Gm5640A3KG49 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms